BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A06LP1|AL430469
(645 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig501 1114 0.0
>3x_Contig501
Length = 2416
Score = 1114 bits (561), Expect = 0.0
Identities = 630/649 (97%), Gaps = 4/649 (0%)
Strand = Plus / Minus
Query: 1 gatcatctttgtatttgtcatttatggtggtggttccagtatcattgggtctccaggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 gatcatctttgtatttgtcatttatggtggtggttccagtatcattgggtctccaggtaa 1100
Query: 61 gatgtgggatcttctaaccgaagtggctaataagaatccggtctcagataattatcacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 gatgtgggatcttctaaccgaagtggctaataagaatccggtctcagataattatcacgg 1040
Query: 121 ttcctttttaactttcagatccaaagatggtggtatcttcctgttcatttccattatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 ttcctttttaactttcagatccaaagatggtggtatcttcctgttcatttccattatcac 980
Query: 181 tgggtttgggcttgttgtcctagatcaagcttattggtcaagagccattgctgcccaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 tgggtttgggcttgttgtcctagatcaagcttattggtcaagagccattgctgcccaacc 920
Query: 241 tctgaagacctcaaaggcttatttcatcggtgccgtgtcctggttcgttatcccatggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 tctgaagacctcaaaggcttatttcatcggtgccgtgtcctggttcgttatcccatggac 860
Query: 301 tatgggtctatgtttgggtttagcagctagagccacctcgattttacctggatttccacc 360
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 859 tatgggtctatgtttgggtttagcagccagagccacctcgattttacctggattcccacc 800
Query: 361 attgagtgattctgaaatttcttctggtttattagctgtggcaggtg-ctttya-cttgt 418
|||||||||||||||||||||||||||||||| |||||||||||||| || | | |||||
Sbjct: 799 attgagtgattctgaaatttcttctggtttatcagctgtggcaggtgcctctcaccttgt 740
Query: 419 tgg-catg-aggtactggtatgattttactcatgatctttttgtcagtgacttcctcatt 476
|| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 739 cggccatgcaggtactggtatgattctactcatgatctttttgtcagtgacttcctcatt 680
Query: 477 ctctggtgagttgattgctactttaaatttgctatcttaagatgtttacaagaaatacat 536
||||||||||||||| ||||||| || |||||||||||| ||||||||||||||||||||
Sbjct: 679 ctctggtgagttgatcgctacttcaactttgctatcttacgatgtttacaagaaatacat 620
Query: 537 taagcaaaaagctactcctcatgaagttttgctagtctctaagattggtgtctttttctg 596
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 619 taagcaaaacgctactcctcatgaagttttgctagtctctaagatcggtgtctttttctg 560
Query: 597 ggcgatctttgctggtagtattgccagtatctyccacagaatcggtatt 645
||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 559 ggccatctttgctggtagtattgccagtatcttccacagaatcggtatt 511
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4277
Number of Sequences: 1807
Number of extensions: 4277
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 1
length of query: 645
length of database: 10,358,551
effective HSP length: 16
effective length of query: 629
effective length of database: 10,329,639
effective search space: 6497342931
effective search space used: 6497342931
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)